J3_9BH5_017
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- CUAGC*GGAUAAG*CACGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 9BH5|1|B2|U|1371
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BH5|1|B2|C|1293
9BH5|1|B2|U|1294
9BH5|1|B2|A|1295
9BH5|1|B2|G|1296
9BH5|1|B2|C|1297
*
9BH5|1|B2|G|1344
9BH5|1|B2|G|1345
9BH5|1|B2|A|1346
9BH5|1|B2|U|1347
9BH5|1|B2|A|1348
9BH5|1|B2|A|1349
9BH5|1|B2|G|1350
*
9BH5|1|B2|C|1364
9BH5|1|B2|A|1365
9BH5|1|B2|C|1366
9BH5|1|B2|G|1367
9BH5|1|B2|A|1368
9BH5|1|B2|G|1369
9BH5|1|B2|A|1370
9BH5|1|B2|U|1371
9BH5|1|B2|U|1372
9BH5|1|B2|G|1373
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AD
- Small ribosomal subunit protein uS3
- Chain AF
- Small ribosomal subunit protein uS7
- Chain AQ
- Small ribosomal subunit protein uS9
- Chain AR
- Small ribosomal subunit protein eS17
- Chain AU
- Small ribosomal subunit protein uS10
- Chain Ac
- Small ribosomal subunit protein eS28
- Chain Ad
- Small ribosomal subunit protein uS14
Coloring options: