J3_9BH5_023

3D structure

PDB id

9BH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution C. elegans 80S ribosome structure - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

AU*AC*GUGAAAGU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BH5|1|A5|A|443
9BH5|1|A5|U|444
*
9BH5|1|A5|A|514
9BH5|1|A5|C|515
*
9BH5|1|A5|G|642
9BH5|1|A5|U|643
9BH5|1|A5|G|644
9BH5|1|A5|A|645
9BH5|1|A5|A|646
9BH5|1|A5|A|647
9BH5|1|A5|G|648
9BH5|1|A5|U|649

Current chains

Chain A5

28S rRNA

Nearby chains

Chain CE

Large ribosomal subunit protein eL6

Chain Ce

Large ribosomal subunit protein eL32

Chain Cf

Large ribosomal subunit protein eL33