J3_9C3H_006

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

9C3H|1|L5|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C3H|1|L5|C|196
9C3H|1|L5|A|197
9C3H|1|L5|A|198
9C3H|1|L5|G|199
*
9C3H|1|L5|C|215
9C3H|1|L5|C|216
9C3H|1|L5|C|217
9C3H|1|L5|A|218
9C3H|1|L5|G|219
9C3H|1|L5|C|220
9C3H|1|L5|C|221
9C3H|1|L5|C|222
9C3H|1|L5|G|223
9C3H|1|L5|U|224
9C3H|1|L5|G|225
9C3H|1|L5|G|226
9C3H|1|L5|A|227
9C3H|1|L5|C|228
*
9C3H|1|L5|G|240
9C3H|1|L5|G|241
9C3H|1|L5|U|242
9C3H|1|L5|A|243
9C3H|1|L5|G|244

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

Large ribosomal subunit protein uL4

Chain LE

Large ribosomal subunit protein uL24