J3_9C3H_007

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

9C3H|1|L5|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C3H|1|L5|C|451
9C3H|1|L5|A|452
9C3H|1|L5|G|453
9C3H|1|L5|U|454
9C3H|1|L5|C|455
*
9C3H|1|L5|G|701
9C3H|1|L5|U|702
9C3H|1|L5|G|703
9C3H|1|L5|C|704
9C3H|1|L5|G|705
*
9C3H|1|L5|C|1292
9C3H|1|L5|G|1293
9C3H|1|L5|A|1294
9C3H|1|L5|C|1295
9C3H|1|L5|G|1296

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LI

Large ribosomal subunit protein eL32

Chain LK

Large ribosomal subunit protein eL6

Chain Lf

Large ribosomal subunit protein eL33