3D structure

PDB id
9E0N (explore in PDB, NAKB, or RNA 3D Hub)
Description
M. smegmatis unmethylated 70S ribosome structure
Experimental method
ELECTRON MICROSCOPY
Resolution
3.24 Å

Loop

Sequence
CCUUGU*AGAC*GGUGGGG
Length
17 nucleotides
Bulged bases
9E0N|1|a|U|1164
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9E0N|1|a|C|1093
9E0N|1|a|C|1094
9E0N|1|a|U|1095
9E0N|1|a|U|1096
9E0N|1|a|G|1097
9E0N|1|a|U|1098
*
9E0N|1|a|A|1136
9E0N|1|a|G|1137
9E0N|1|a|A|1138
9E0N|1|a|C|1139
*
9E0N|1|a|G|1162
9E0N|1|a|G|1163
9E0N|1|a|U|1164
9E0N|1|a|G|1165
9E0N|1|a|G|1166
9E0N|1|a|G|1167
9E0N|1|a|G|1168

Current chains

Chain a
16S rRNA

Nearby chains

Chain c
Small ribosomal subunit protein uS3
Chain g
Small ribosomal subunit protein uS7
Chain i
Small ribosomal subunit protein uS9
Chain j
Small ribosomal subunit protein uS10
Chain n
Small ribosomal subunit protein uS14B

Coloring options:

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