J3_9E0P_005

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

GUG*CGAGUAG*UGAAUC

Length

16 nucleotides

Bulged bases

9E0P|1|A|U|318, 9E0P|1|A|G|458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0P|1|A|G|317
9E0P|1|A|U|318
9E0P|1|A|G|319
*
9E0P|1|A|C|457
9E0P|1|A|G|458
9E0P|1|A|A|459
9E0P|1|A|G|460
9E0P|1|A|U|461
9E0P|1|A|A|462
9E0P|1|A|G|463
*
9E0P|1|A|U|487
9E0P|1|A|G|488
9E0P|1|A|A|489
9E0P|1|A|A|490
9E0P|1|A|U|491
9E0P|1|A|C|492

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9

Chain Y

Large ribosomal subunit protein bL28