J3_9E0P_010

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CAGGA*UUGAAAG*CACUG

Length

17 nucleotides

Bulged bases

9E0P|1|A|A|1202

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0P|1|A|C|1171
9E0P|1|A|A|1172
9E0P|1|A|G|1173
9E0P|1|A|G|1174
9E0P|1|A|A|1175
*
9E0P|1|A|U|1199
9E0P|1|A|U|1200
9E0P|1|A|G|1201
9E0P|1|A|A|1202
9E0P|1|A|A|1203
9E0P|1|A|A|1204
9E0P|1|A|G|1205
*
9E0P|1|A|C|1220
9E0P|1|A|A|1221
9E0P|1|A|C|1222
9E0P|1|A|U|1223
9E0P|1|A|G|1224

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L36

Chain I

Large ribosomal subunit protein uL10

Chain J

Large ribosomal subunit protein uL11