J3_9E0P_026

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CUAG*CGUAG*CAUUAAG

Length

16 nucleotides

Bulged bases

9E0P|1|a|U|853

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0P|1|a|C|806
9E0P|1|a|U|807
9E0P|1|a|A|808
9E0P|1|a|G|809
*
9E0P|1|a|C|839
9E0P|1|a|G|840
9E0P|1|a|U|841
9E0P|1|a|A|842
9E0P|1|a|G|843
*
9E0P|1|a|C|850
9E0P|1|a|A|851
9E0P|1|a|U|852
9E0P|1|a|U|853
9E0P|1|a|A|854
9E0P|1|a|A|855
9E0P|1|a|G|856

Current chains

Chain a

16S rRNA

Nearby chains

Chain b

Small ribosomal subunit protein uS2

Chain h

Small ribosomal subunit protein uS8