J3_9E16_001
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GCCACAG*CGC*GACAC
- Length
- 15 nucleotides
- Bulged bases
- 9E16|1|B|C|13, 9E16|1|B|C|104
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9E16_001 not in the Motif Atlas
- Homologous match to J3_8B0X_026
- Geometric discrepancy: 0.1932
- The information below is about J3_8B0X_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9E16|1|B|G|9
9E16|1|B|C|10
9E16|1|B|C|11
9E16|1|B|A|12
9E16|1|B|C|13
9E16|1|B|A|14
9E16|1|B|G|15
*
9E16|1|B|C|67
9E16|1|B|G|68
9E16|1|B|C|69
*
9E16|1|B|G|102
9E16|1|B|A|103
9E16|1|B|C|104
9E16|1|B|A|105
9E16|1|B|C|106
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain O
- 50S ribosomal protein L18
- Chain W
- 50S ribosomal protein L27
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