J3_9E16_005
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AC*GAUAUGC*GAUUU
- Length
- 14 nucleotides
- Bulged bases
- 9E16|1|I|U|72, 9E16|1|I|U|74
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9E16_005 not in the Motif Atlas
- Homologous match to J3_8B0X_015
- Geometric discrepancy: 0.0722
- The information below is about J3_8B0X_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01004.3
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 11
Unit IDs
9E16|1|I|A|56
9E16|1|I|C|57
*
9E16|1|I|G|70
9E16|1|I|A|71
9E16|1|I|U|72
9E16|1|I|A|73
9E16|1|I|U|74
9E16|1|I|G|75
9E16|1|I|C|76
*
9E16|1|I|G|110
9E16|1|I|A|111
9E16|1|I|U|112
9E16|1|I|U|113
9E16|1|I|U|114
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain T
- 50S ribosomal protein L23
- Chain Y
- 50S ribosomal protein L29
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