J3_9E1S_006

3D structure

PDB id

9E1S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

GUG*CGAGUAG*UGAAUC

Length

16 nucleotides

Bulged bases

9E1S|1|I|U|319, 9E1S|1|I|G|459

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E1S|1|I|G|318
9E1S|1|I|U|319
9E1S|1|I|G|320
*
9E1S|1|I|C|458
9E1S|1|I|G|459
9E1S|1|I|A|460
9E1S|1|I|G|461
9E1S|1|I|U|462
9E1S|1|I|A|463
9E1S|1|I|G|464
*
9E1S|1|I|U|488
9E1S|1|I|G|489
9E1S|1|I|A|490
9E1S|1|I|A|491
9E1S|1|I|U|492
9E1S|1|I|C|493

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L9

Chain y

50S ribosomal protein bL28-c minus