J3_9E1S_021

3D structure

PDB id

9E1S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

CCC*GUUCAAU*AACCG

Length

15 nucleotides

Bulged bases

9E1S|1|I|C|3068, 9E1S|1|I|A|3070, 9E1S|1|I|C|3119, 9E1S|1|I|C|3120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E1S|1|I|C|3049
9E1S|1|I|C|3050
9E1S|1|I|C|3051
*
9E1S|1|I|G|3065
9E1S|1|I|U|3066
9E1S|1|I|U|3067
9E1S|1|I|C|3068
9E1S|1|I|A|3069
9E1S|1|I|A|3070
9E1S|1|I|U|3071
*
9E1S|1|I|A|3117
9E1S|1|I|A|3118
9E1S|1|I|C|3119
9E1S|1|I|C|3120
9E1S|1|I|G|3121

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17