J3_9E6Q_010
3D structure
- PDB id
- 9E6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Pyrobaculum calidifontis 50S ribosomal subunit in complex with Dri
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.95 Å
Loop
- Sequence
- ACCAG*CGAGAAC*GUGCU
- Length
- 17 nucleotides
- Bulged bases
- 9E6Q|1|1|G|1750, 9E6Q|1|1|A|1751, 9E6Q|1|1|C|1765
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9E6Q|1|1|A|1434
9E6Q|1|1|C|1435
9E6Q|1|1|C|1436
9E6Q|1|1|A|1437
9E6Q|1|1|G|1438
*
9E6Q|1|1|C|1747
9E6Q|1|1|G|1748
9E6Q|1|1|A|1749
9E6Q|1|1|G|1750
9E6Q|1|1|A|1751
9E6Q|1|1|A|1752
9E6Q|1|1|C|1753
*
9E6Q|1|1|G|1762
9E6Q|1|1|U|1763
9E6Q|1|1|G|1764
9E6Q|1|1|C|1765
9E6Q|1|1|U|1766
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain AQ
- Large ribosomal subunit protein eL19
- Chain Ac
- Large ribosomal subunit protein eL34
- Chain Ad
- Large ribosomal subunit protein eL37
- Chain Af
- Large ribosomal subunit protein eL39
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