J3_9E6Q_012
3D structure
- PDB id
- 9E6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Pyrobaculum calidifontis 50S ribosomal subunit in complex with Dri
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.95 Å
Loop
- Sequence
- GGUUCUG*CAGGC*GAAC
- Length
- 16 nucleotides
- Bulged bases
- 9E6Q|1|1|U|1551, 9E6Q|1|1|A|1562
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9E6Q|1|1|G|1546
9E6Q|1|1|G|1547
9E6Q|1|1|U|1548
9E6Q|1|1|U|1549
9E6Q|1|1|C|1550
9E6Q|1|1|U|1551
9E6Q|1|1|G|1552
*
9E6Q|1|1|C|1561
9E6Q|1|1|A|1562
9E6Q|1|1|G|1563
9E6Q|1|1|G|1564
9E6Q|1|1|C|1565
*
9E6Q|1|1|G|1725
9E6Q|1|1|A|1726
9E6Q|1|1|A|1727
9E6Q|1|1|C|1728
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain AJ
- eL14
- Chain Ac
- Large ribosomal subunit protein eL34
- Chain Ak
- PaREP1 domain containing protein
Coloring options: