J3_9EBB_030
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUUG*CAG*CUUAUG
- Length
- 13 nucleotides
- Bulged bases
- 9EBB|1|a|U|1206
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9EBB_030 not in the Motif Atlas
- Geometric match to J3_8B0X_008
- Geometric discrepancy: 0.1627
- The information below is about J3_8B0X_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_84394.1
- Basepair signature
- cWW-tWH-F-F-cWW-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
9EBB|1|a|U|983
9EBB|1|a|U|984
9EBB|1|a|U|985
9EBB|1|a|G|986
*
9EBB|1|a|C|1036
9EBB|1|a|A|1037
9EBB|1|a|G|1038
*
9EBB|1|a|C|1202
9EBB|1|a|U|1203
9EBB|1|a|U|1204
9EBB|1|a|A|1205
9EBB|1|a|U|1206
9EBB|1|a|G|1207
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain 9
- Small ribosomal subunit protein uS14
Coloring options: