J3_9EC3_033
3D structure
- PDB id
- 9EC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- UGU*AGAC*GGUG
- Length
- 11 nucleotides
- Bulged bases
- 9EC3|1|a|U|1175
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9EC3_033 not in the Motif Atlas
- Geometric match to J3_8B0X_012
- Geometric discrepancy: 0.2117
- The information below is about J3_8B0X_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82365.7
- Basepair signature
- cWW-F-cWW-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
9EC3|1|a|U|1107
9EC3|1|a|G|1108
9EC3|1|a|U|1109
*
9EC3|1|a|A|1147
9EC3|1|a|G|1148
9EC3|1|a|A|1149
9EC3|1|a|C|1150
*
9EC3|1|a|G|1173
9EC3|1|a|G|1174
9EC3|1|a|U|1175
9EC3|1|a|G|1176
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain 9
- Small ribosomal subunit protein uS14
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
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