J3_9EHO_012
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUG*CUCAC*GAACAG
- Length
- 14 nucleotides
- Bulged bases
- 9EHO|1|5|C|4002
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|5|U|3748
9EHO|1|5|U|3749
9EHO|1|5|G|3750
*
9EHO|1|5|C|4000
9EHO|1|5|U|4001
9EHO|1|5|C|4002
9EHO|1|5|A|4003
9EHO|1|5|C|4004
*
9EHO|1|5|G|4124
9EHO|1|5|A|4125
9EHO|1|5|A|4126
9EHO|1|5|C|4127
9EHO|1|5|A|4128
9EHO|1|5|G|4129
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain A
- Large ribosomal subunit protein uL2
- Chain G
- 60S ribosomal protein L7a
- Chain N
- Ribosomal protein L15
- Chain i
- Large ribosomal subunit protein eL36
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