J3_9EHO_029
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCUUAG*CGAGAC*GCGAUA
- Length
- 18 nucleotides
- Bulged bases
- 9EHO|1|AA|U|1959
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|AA|U|1957
9EHO|1|AA|C|1958
9EHO|1|AA|U|1959
9EHO|1|AA|U|1960
9EHO|1|AA|A|1961
9EHO|1|AA|G|1962
*
9EHO|1|AA|C|2001
9EHO|1|AA|G|2002
9EHO|1|AA|A|2003
9EHO|1|AA|G|2004
9EHO|1|AA|A|2005
9EHO|1|AA|C|2006
*
9EHO|1|AA|G|2385
9EHO|1|AA|C|2386
9EHO|1|AA|G|2387
9EHO|1|AA|A|2388
9EHO|1|AA|U|2389
9EHO|1|AA|A|2390
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain DD
- Small ribosomal subunit protein uS5
- Chain EE
- 40S ribosomal protein S3
- Chain RR
- 40S ribosomal protein S16
- Chain SS
- Small ribosomal subunit protein eS17
- Chain VV
- Small ribosomal subunit protein uS10
- Chain ee
- Small ribosomal subunit protein uS14
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