J3_9EHO_033
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CACUG*CGUGAUAG*CGAG
- Length
- 17 nucleotides
- Bulged bases
- 9EHO|1|AA|U|2439, 9EHO|1|AA|A|2509
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|AA|C|2436
9EHO|1|AA|A|2437
9EHO|1|AA|C|2438
9EHO|1|AA|U|2439
9EHO|1|AA|G|2440
*
9EHO|1|AA|C|2503
9EHO|1|AA|G|2504
9EHO|1|AA|U|2505
9EHO|1|AA|G|2506
9EHO|1|AA|A|2507
9EHO|1|AA|U|2508
9EHO|1|AA|A|2509
9EHO|1|AA|G|2510
*
9EHO|1|AA|C|2540
9EHO|1|AA|G|2541
9EHO|1|AA|A|2542
9EHO|1|AA|G|2543
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain GG
- Ribosomal S5
- Chain TT
- Small ribosomal subunit protein uS13
- Chain UU
- 40S ribosomal protein S19
- Chain aa
- 40S ribosomal protein S25
Coloring options: