3D structure

PDB id
9F1B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
Experimental method
ELECTRON MICROSCOPY
Resolution
3.01 Å

Loop

Sequence
AGAUG*CAGU*AGGGUGUAAAU
Length
20 nucleotides
Bulged bases
9F1B|1|B5|U|2606
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9F1B|1|B5|A|2394
9F1B|1|B5|G|2395
9F1B|1|B5|A|2396
9F1B|1|B5|U|2397
9F1B|1|B5|G|2398
*
9F1B|1|B5|C|2415
9F1B|1|B5|A|2416
9F1B|1|B5|G|2417
9F1B|1|B5|U|2418
*
9F1B|1|B5|A|2600
9F1B|1|B5|G|2601
9F1B|1|B5|G|2602
9F1B|1|B5|G|2603
9F1B|1|B5|U|2604
9F1B|1|B5|G|2605
9F1B|1|B5|U|2606
9F1B|1|B5|A|2607
9F1B|1|B5|A|2608
9F1B|1|B5|A|2609
9F1B|1|B5|U|2610

Current chains

Chain B5
28S rRNA

Nearby chains

Chain BZ
60S ribosomal protein L27

Coloring options:

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