J3_9F58_012

3D structure

PDB id

9F58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Gcn2 dimer bound to the 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACGGUGGC*GAAUCCGCUAAGG*CAC

Length

25 nucleotides

Bulged bases

9F58|1|a|G|1236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F58|1|a|G|1230
9F58|1|a|A|1231
9F58|1|a|C|1232
9F58|1|a|G|1233
9F58|1|a|G|1234
9F58|1|a|U|1235
9F58|1|a|G|1236
9F58|1|a|G|1237
9F58|1|a|C|1238
*
9F58|1|a|G|1250
9F58|1|a|A|1251
9F58|1|a|A|1252
9F58|1|a|U|1253
9F58|1|a|C|1254
9F58|1|a|C|1255
9F58|1|a|G|1256
9F58|1|a|C|1257
9F58|1|a|U|1258
9F58|1|a|A|1259
9F58|1|a|A|1260
9F58|1|a|G|1261
9F58|1|a|G|1262
*
9F58|1|a|C|1277
9F58|1|a|A|1278
9F58|1|a|C|1279

Current chains

Chain a

25S rRNA

Nearby chains