J3_9F9S_011

3D structure

PDB id

9F9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast SDD1 Disome with Mbf1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGAC*GCUAAGGAGUG*CUCACC

Length

21 nucleotides

Bulged bases

9F9S|1|L1|A|1263

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F9S|1|L1|G|1229
9F9S|1|L1|G|1230
9F9S|1|L1|A|1231
9F9S|1|L1|C|1232
*
9F9S|1|L1|G|1256
9F9S|1|L1|C|1257
9F9S|1|L1|U|1258
9F9S|1|L1|A|1259
9F9S|1|L1|A|1260
9F9S|1|L1|G|1261
9F9S|1|L1|G|1262
9F9S|1|L1|A|1263
9F9S|1|L1|G|1264
9F9S|1|L1|U|1265
9F9S|1|L1|G|1266
*
9F9S|1|L1|C|1275
9F9S|1|L1|U|1276
9F9S|1|L1|C|1277
9F9S|1|L1|A|1278
9F9S|1|L1|C|1279
9F9S|1|L1|C|1280

Current chains

Chain L1

Saccharomyces cerevisiae S288C 25S ribosomal RNA (RDN25-1)

Nearby chains