J3_9G6J_009
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UGAACUA*UAG*CGAA
- Length
- 14 nucleotides
- Bulged bases
- 9G6J|1|1|A|813, 9G6J|1|1|G|920, 9G6J|1|1|A|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9G6J_009 not in the Motif Atlas
- Homologous match to J3_8CRE_009
- Geometric discrepancy: 0.0479
- The information below is about J3_8CRE_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_64189.2
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
9G6J|1|1|U|810
9G6J|1|1|G|811
9G6J|1|1|A|812
9G6J|1|1|A|813
9G6J|1|1|C|814
9G6J|1|1|U|815
9G6J|1|1|A|816
*
9G6J|1|1|U|901
9G6J|1|1|A|902
9G6J|1|1|G|903
*
9G6J|1|1|C|919
9G6J|1|1|G|920
9G6J|1|1|A|921
9G6J|1|1|A|922
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AK
- Ribosomal protein L37
- Chain j
- Ribosomal 60S subunit protein L2A
- Chain v
- Ribosomal protein L15
Coloring options: