J3_9G6J_038

3D structure

PDB id

9G6J (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

GUG*UGUC*GAUAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9G6J|1|A|G|1277
9G6J|1|A|U|1278
9G6J|1|A|G|1279
*
9G6J|1|A|U|1288
9G6J|1|A|G|1289
9G6J|1|A|U|1290
9G6J|1|A|C|1291
*
9G6J|1|A|G|1303
9G6J|1|A|A|1304
9G6J|1|A|U|1305
9G6J|1|A|A|1306
9G6J|1|A|A|1307
9G6J|1|A|C|1308

Current chains

Chain A

18S rRNA

Nearby chains

Chain B

40S ribosomal protein S0

Chain D

Ribosomal 40S subunit protein S2

Chain S

Ribosomal 40S subunit protein S17B