J3_9G7C_013

3D structure

PDB id

9G7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of raiA ncRNA from Clostridium reveals a new RNA 3D fold

Experimental method

ELECTRON MICROSCOPY

Resolution

3.27 Å

Loop

Sequence

UUGAAAG*UCC*GGGGGCAAAAA

Length

21 nucleotides

Bulged bases

9G7C|5|A|A|204

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9G7C|5|A|U|18
9G7C|5|A|U|19
9G7C|5|A|G|20
9G7C|5|A|A|21
9G7C|5|A|A|22
9G7C|5|A|A|23
9G7C|5|A|G|24
*
9G7C|5|A|U|50
9G7C|5|A|C|51
9G7C|5|A|C|52
*
9G7C|5|A|G|196
9G7C|5|A|G|197
9G7C|5|A|G|198
9G7C|5|A|G|199
9G7C|5|A|G|200
9G7C|5|A|C|201
9G7C|5|A|A|202
9G7C|5|A|A|203
9G7C|5|A|A|204
9G7C|5|A|A|205
9G7C|5|A|A|206

Current chains

Chain A

raiA (224-MER)

Nearby chains