J3_9GFT_068
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUG*CC*GAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9GFT_068 not in the Motif Atlas
- Homologous match to J3_5J7L_047
- Geometric discrepancy: 0.2136
- The information below is about J3_5J7L_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_30104.1
- Basepair signature
- cWW-F-F-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
9GFT|1|N|C|2789
9GFT|1|N|U|2790
9GFT|1|N|G|2791
*
9GFT|1|N|C|2805
9GFT|1|N|C|2806
*
9GFT|1|N|G|2892
9GFT|1|N|A|2893
9GFT|1|N|G|2894
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain Q
- 50S ribosomal protein L3
Coloring options: