J3_9GHG_033
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- UG*UGUU*GCAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9GHG_033 not in the Motif Atlas
- Homologous match to J3_4LFB_017
- Geometric discrepancy: 0.1002
- The information below is about J3_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11018.1
- Basepair signature
- cWW-cWW-tSS-F-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
9GHG|1|a|U|1084
9GHG|1|a|G|1085
*
9GHG|1|a|U|1094
9GHG|1|a|G|1095
9GHG|1|a|U|1096
9GHG|1|a|U|1097
*
9GHG|1|a|G|1110
9GHG|1|a|C|1111
9GHG|1|a|A|1112
9GHG|1|a|A|1113
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S2
- Chain f
- 30S ribosomal protein S5
Coloring options: