J3_9GHH_023
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGG*CUUG*CG
- Length
- 9 nucleotides
- Bulged bases
- 9GHH|1|a|U|661
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9GHH_023 not in the Motif Atlas
- Geometric match to J3_5J7L_002
- Geometric discrepancy: 0.0899
- The information below is about J3_5J7L_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_56052.5
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
9GHH|1|a|C|594
9GHH|1|a|G|595
9GHH|1|a|G|596
*
9GHH|1|a|C|659
9GHH|1|a|U|660
9GHH|1|a|U|661
9GHH|1|a|G|662
*
9GHH|1|a|C|762
9GHH|1|a|G|763
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S8
- Chain m
- 30S ribosomal protein S12
- Chain p
- 30S ribosomal protein S15
- Chain r
- 30S ribosomal protein S17
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