J3_9GMO_006
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- CAGUC*GUGCG*CGACG
- Length
- 15 nucleotides
- Bulged bases
- 9GMO|1|A|C|704, 9GMO|1|A|C|1295
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GMO|1|A|C|451
9GMO|1|A|A|452
9GMO|1|A|G|453
9GMO|1|A|U|454
9GMO|1|A|C|455
*
9GMO|1|A|G|701
9GMO|1|A|U|702
9GMO|1|A|G|703
9GMO|1|A|C|704
9GMO|1|A|G|705
*
9GMO|1|A|C|1292
9GMO|1|A|G|1293
9GMO|1|A|A|1294
9GMO|1|A|C|1295
9GMO|1|A|G|1296
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain H
- Large ribosomal subunit protein eL6
- Chain Y
- 60S ribosomal protein L32
- Chain Z
- 60S ribosomal protein L35a
Coloring options: