J3_9GR1_026
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CAAG*CCCAAAC*GUG
- Length
- 14 nucleotides
- Bulged bases
- 9GR1|1|a|A|1611
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9GR1_026 not in the Motif Atlas
- Homologous match to J3_9DFE_011
- Geometric discrepancy: 0.1112
- The information below is about J3_9DFE_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47341.1
- Basepair signature
- cWW-tHH-F-tHW-tHS-tWW-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
9GR1|1|a|C|1308
9GR1|1|a|A|1309
9GR1|1|a|A|1310
9GR1|1|a|G|1311
*
9GR1|1|a|C|1607
9GR1|1|a|C|1608
9GR1|1|a|C|1609
9GR1|1|a|A|1610
9GR1|1|a|A|1611
9GR1|1|a|A|1612
9GR1|1|a|C|1613
*
9GR1|1|a|G|1622
9GR1|1|a|U|1623
9GR1|1|a|G|1624
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L34
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