J3_9GUL_004

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UUGAAAAG*CG*CA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|U|380
9GUL|1|L5|U|381
9GUL|1|L5|G|382
9GUL|1|L5|A|383
9GUL|1|L5|A|384
9GUL|1|L5|A|385
9GUL|1|L5|A|386
9GUL|1|L5|G|387
*
9GUL|1|L5|C|414
9GUL|1|L5|G|415
*
9GUL|1|L8|C|19
9GUL|1|L8|A|20

Current chains

Chain L5

28S rRNA

Chain L8

5.8S rRNA

Nearby chains

Chain LC

Large ribosomal subunit protein uL4

Chain LY

60S ribosomal protein L26

Chain Ll

60S ribosomal protein L39