J3_9GUL_011

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GAAG*CCAUAUC*GUC

Length

14 nucleotides

Bulged bases

9GUL|1|L5|U|2788, 9GUL|1|L5|A|2789, 9GUL|1|L5|U|2790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|G|2402
9GUL|1|L5|A|2403
9GUL|1|L5|A|2404
9GUL|1|L5|G|2405
*
9GUL|1|L5|C|2785
9GUL|1|L5|C|2786
9GUL|1|L5|A|2787
9GUL|1|L5|U|2788
9GUL|1|L5|A|2789
9GUL|1|L5|U|2790
9GUL|1|L5|C|2791
*
9GUL|1|L5|G|2800
9GUL|1|L5|U|2801
9GUL|1|L5|C|2802

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Lg

60S ribosomal protein L34

Chain Lj

60S ribosomal protein L37

Chain Ll

60S ribosomal protein L39