J3_9H3G_008

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

CGGCGAUG*UGG*CUGUGG

Length

17 nucleotides

Bulged bases

9H3G|1|A|G|435, 9H3G|1|A|U|632

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|A|C|433
9H3G|1|A|G|434
9H3G|1|A|G|435
9H3G|1|A|C|436
9H3G|1|A|G|437
9H3G|1|A|A|438
9H3G|1|A|U|439
9H3G|1|A|G|440
*
9H3G|1|A|U|495
9H3G|1|A|G|496
9H3G|1|A|G|497
*
9H3G|1|A|C|629
9H3G|1|A|U|630
9H3G|1|A|G|631
9H3G|1|A|U|632
9H3G|1|A|G|633
9H3G|1|A|G|634

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AQ

Large ribosomal subunit protein eL28z

Chain AV

Large ribosomal subunit protein eL32z

Chain AW

Large ribosomal subunit protein eL33y