J3_9H3G_022
3D structure
- PDB id
- 9H3G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.82 Å
Loop
- Sequence
- (OMG)UC*GCCUAUCGAUCC*(OMG)GUGUC
- Length
- 21 nucleotides
- Bulged bases
- 9H3G|1|A|C|2759, 9H3G|1|A|U|2796
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H3G|1|A|OMG|2650
9H3G|1|A|U|2651
9H3G|1|A|C|2652
*
9H3G|1|A|G|2753
9H3G|1|A|C|2754
9H3G|1|A|C|2755
9H3G|1|A|U|2756
9H3G|1|A|A|2757
9H3G|1|A|U|2758
9H3G|1|A|C|2759
9H3G|1|A|G|2760
9H3G|1|A|A|2761
9H3G|1|A|U|2762
9H3G|1|A|C|2763
9H3G|1|A|C|2764
*
9H3G|1|A|OMG|2792
9H3G|1|A|G|2793
9H3G|1|A|U|2794
9H3G|1|A|G|2795
9H3G|1|A|U|2796
9H3G|1|A|C|2797
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain AJ
- Large ribosomal subunit protein eL18x
- Chain AM
- Large ribosomal subunit protein eL21z/eL21y
- Chain BD
- Large ribosomal subunit protein eL42z/eL42y
- Chain Ha
- Large ribosomal subunit protein uL15x
- Chain W2
- Transfer RNA; tRNA
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