J3_9H3W_004
3D structure
- PDB id
- 9H3W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S subunit precursor C-CP_H68
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.38 Å
Loop
- Sequence
- UGAUCUA*UGG*CAAA
- Length
- 14 nucleotides
- Bulged bases
- 9H3W|1|A|U|686, 9H3W|1|A|A|792, 9H3W|1|A|A|793
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9H3W_004 not in the Motif Atlas
- Homologous match to J3_7A0S_004
- Geometric discrepancy: 0.1921
- The information below is about J3_7A0S_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46658.1
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
9H3W|1|A|U|683
9H3W|1|A|G|684
9H3W|1|A|A|685
9H3W|1|A|U|686
9H3W|1|A|C|687
9H3W|1|A|U|688
9H3W|1|A|A|689
*
9H3W|1|A|U|773
9H3W|1|A|G|774
9H3W|1|A|G|775
*
9H3W|1|A|C|791
9H3W|1|A|A|792
9H3W|1|A|A|793
9H3W|1|A|A|794
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL34
- Chain C
- Large ribosomal subunit protein uL2
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