J3_9H51_008

3D structure

PDB id

9H51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with PUS1, METTL15 and RBFA(IN conformation) (state M1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUUU*AAACUAC*GGUG

Length

16 nucleotides

Bulged bases

9H51|1|A|U|1369, 9H51|1|A|C|1385, 9H51|1|A|U|1386

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H51|1|A|C|1366
9H51|1|A|A|1367
9H51|1|A|U|1368
9H51|1|A|U|1369
9H51|1|A|U|1370
*
9H51|1|A|A|1382
9H51|1|A|A|1383
9H51|1|A|A|1384
9H51|1|A|C|1385
9H51|1|A|U|1386
9H51|1|A|A|1387
9H51|1|A|C|1388
*
9H51|1|A|G|1418
9H51|1|A|G|1419
9H51|1|A|U|1420
9H51|1|A|G|1421

Current chains

Chain A

RNA (969-MER)

Nearby chains

Chain F

28S ribosomal protein S7, mitochondrial

Chain X

28S ribosomal protein S29, mitochondrial