J3_9H52_005

3D structure

PDB id

9H52 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1, ERAL1, METTL17, MCAT and TFB1M (state N1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGUAAUCG*CAC*GCAA

Length

15 nucleotides

Bulged bases

9H52|1|A|A|1353

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H52|1|A|U|1210
9H52|1|A|G|1211
9H52|1|A|U|1212
9H52|1|A|A|1213
9H52|1|A|A|1214
9H52|1|A|U|1215
9H52|1|A|C|1216
9H52|1|A|G|1217
*
9H52|1|A|C|1236
9H52|1|A|A|1237
9H52|1|A|C|1238
*
9H52|1|A|G|1351
9H52|1|A|C|1352
9H52|1|A|A|1353
9H52|1|A|A|1354

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 7

Isoform 2 of Ribosome assembly protein METTL17, mitochondrial

Chain 8

Malonyl-CoA-acyl carrier protein transacylase, mitochondrial