J3_9H54_001

3D structure

PDB id

9H54 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and partial RBFA (state N2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUCU*ACCCCAG*CAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H54|1|A|C|677
9H54|1|A|U|678
9H54|1|A|C|679
9H54|1|A|U|680
*
9H54|1|A|A|866
9H54|1|A|C|867
9H54|1|A|C|868
9H54|1|A|C|869
9H54|1|A|C|870
9H54|1|A|A|871
9H54|1|A|G|872
*
9H54|1|A|C|917
9H54|1|A|A|918
9H54|1|A|A|919
9H54|1|A|G|920

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain J

28S ribosomal protein S12, mitochondrial

Chain O

28S ribosomal protein S18b, mitochondrial