J3_9H54_004

3D structure

PDB id

9H54 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and partial RBFA (state N2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUC*GCAGUAA*UGAACAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H54|1|A|C|1192
9H54|1|A|U|1193
9H54|1|A|C|1194
*
9H54|1|A|G|1428
9H54|1|A|C|1429
9H54|1|A|A|1430
9H54|1|A|G|1431
9H54|1|A|U|1432
9H54|1|A|A|1433
9H54|1|A|A|1434
*
9H54|1|A|U|1456
9H54|1|A|G|1457
9H54|1|A|A|1458
9H54|1|A|A|1459
9H54|1|A|C|1460
9H54|1|A|A|1461
9H54|1|A|G|1462

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain F

28S ribosomal protein S7, mitochondrial

Chain G

28S ribosomal protein S9, mitochondrial