J3_9H54_006

3D structure

PDB id

9H54 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and partial RBFA (state N2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

9H54|1|A|U|1229, 9H54|1|A|C|1230

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H54|1|A|U|1210
9H54|1|A|G|1211
9H54|1|A|U|1212
9H54|1|A|A|1213
9H54|1|A|A|1214
9H54|1|A|U|1215
9H54|1|A|C|1216
*
9H54|1|A|G|1227
9H54|1|A|A|1228
9H54|1|A|U|1229
9H54|1|A|C|1230
9H54|1|A|A|1231
9H54|1|A|A|1232
9H54|1|A|C|1233
9H54|1|A|C|1234
9H54|1|A|U|1235
9H54|1|A|C|1236
9H54|1|A|A|1237
9H54|1|A|C|1238
*
9H54|1|A|G|1351
9H54|1|A|C|1352
9H54|1|A|A|1353
9H54|1|A|A|1354

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain H

28S ribosomal protein S10, mitochondrial

Chain K

28S ribosomal protein S14, mitochondrial