J3_9H74_011
3D structure
- PDB id
- 9H74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUUAAUUU*GGGAAACCUCAC*GGCUG
- Length
- 25 nucleotides
- Bulged bases
- 9H74|1|2|G|1252, 9H74|1|2|A|1254, 9H74|1|2|A|1256
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H74|1|2|C|1233
9H74|1|2|U|1234
9H74|1|2|U|1235
9H74|1|2|A|1236
9H74|1|2|A|1237
9H74|1|2|U|1238
9H74|1|2|U|1239
9H74|1|2|U|1240
*
9H74|1|2|G|1251
9H74|1|2|G|1252
9H74|1|2|G|1253
9H74|1|2|A|1254
9H74|1|2|A|1255
9H74|1|2|A|1256
9H74|1|2|C|1257
9H74|1|2|C|1258
9H74|1|2|U|1259
9H74|1|2|C|1260
9H74|1|2|A|1261
9H74|1|2|C|1262
*
9H74|1|2|G|1511
9H74|1|2|G|1512
9H74|1|2|C|1513
9H74|1|2|U|1514
9H74|1|2|G|1515
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain R
- 40S ribosomal protein uS19
- Chain U
- 40S ribosomal protein uS13
- Chain W
- 40S ribosomal protein uS10
- Chain e
- 40S ribosomal protein S29
- Chain f
- Ribosomal protein S27a
- Chain j
- Eukaryotic translation initiation factor 1A, X-chromosomal
Coloring options: