J3_9H9N_002

3D structure

PDB id

9H9N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 4 (BODY) 30S-GE81112 (weak residual tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCCUAAC*GGGGAAUAU*AGC

Length

19 nucleotides

Bulged bases

9H9N|1|A|A|51

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H9N|1|A|G|46
9H9N|1|A|C|47
9H9N|1|A|C|48
9H9N|1|A|U|49
9H9N|1|A|A|50
9H9N|1|A|A|51
9H9N|1|A|C|52
*
9H9N|1|A|G|359
9H9N|1|A|G|360
9H9N|1|A|G|361
9H9N|1|A|G|362
9H9N|1|A|A|363
9H9N|1|A|A|364
9H9N|1|A|U|365
9H9N|1|A|A|366
9H9N|1|A|U|367
*
9H9N|1|A|A|393
9H9N|1|A|G|394
9H9N|1|A|C|395

Current chains

Chain A

16S RNA (1078-MER)

Nearby chains

Chain L

Small ribosomal subunit protein uS12

Chain P

Small ribosomal subunit protein bS16