J3_9HA3_001
3D structure
- PDB id
- 9HA3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.62 Å
Loop
- Sequence
- GC*GCGAAAAG*CC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9HA3_001 not in the Motif Atlas
- Homologous match to J3_4WF9_010
- Geometric discrepancy: 0.1852
- The information below is about J3_4WF9_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_68715.1
- Basepair signature
- cWW-tWH-cWW-tSH-F-cWW-F
- Number of instances in this motif group
- 10
Unit IDs
9HA3|1|A|G|30
9HA3|1|A|C|31
*
9HA3|1|A|G|474
9HA3|1|A|C|475
9HA3|1|A|G|476
9HA3|1|A|A|477
9HA3|1|A|A|478
9HA3|1|A|A|479
9HA3|1|A|A|480
9HA3|1|A|G|481
*
9HA3|1|A|C|509
9HA3|1|A|C|510
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain Q
- Large ribosomal subunit protein bL20
- Chain U
- Large ribosomal subunit protein uL24
- Chain y
- Apidaecins type 22
Coloring options: