J3_9HA4_005

3D structure

PDB id

9HA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.26 Å

Loop

Sequence

CAAG*CCCAAACC*GGUG

Length

16 nucleotides

Bulged bases

9HA4|1|A|C|1607, 9HA4|1|A|A|1609, 9HA4|1|A|A|1610

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA4|1|A|C|1306
9HA4|1|A|A|1307
9HA4|1|A|A|1308
9HA4|1|A|G|1309
*
9HA4|1|A|C|1605
9HA4|1|A|C|1606
9HA4|1|A|C|1607
9HA4|1|A|A|1608
9HA4|1|A|A|1609
9HA4|1|A|A|1610
9HA4|1|A|C|1611
9HA4|1|A|C|1612
*
9HA4|1|A|G|1619
9HA4|1|A|G|1620
9HA4|1|A|U|1621
9HA4|1|A|G|1622

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34