3D structure

PDB id
9HA4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pooled 50S subunit C-CP_(L22)- precursor states supplemented with Api137
Experimental method
ELECTRON MICROSCOPY
Resolution
4.26 Å

Loop

Sequence
GGGACG*CC*GAAAAGCC
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9HA4|1|A|G|1424
9HA4|1|A|G|1425
9HA4|1|A|G|1426
9HA4|1|A|A|1427
9HA4|1|A|C|1428
9HA4|1|A|G|1429
*
9HA4|1|A|C|1564
9HA4|1|A|C|1565
*
9HA4|1|A|G|1568
9HA4|1|A|A|1569
9HA4|1|A|A|1570
9HA4|1|A|A|1571
9HA4|1|A|A|1572
9HA4|1|A|G|1573
9HA4|1|A|C|1574
9HA4|1|A|C|1575

Current chains

Chain A
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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