J3_9HLZ_001

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAAUAAGUAU*AGAAAAUA*UAAG

Length

23 nucleotides

Bulged bases

9HLZ|1|AA|U|310, 9HLZ|1|AA|A|312, 9HLZ|1|AA|U|343

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|C|309
9HLZ|1|AA|U|310
9HLZ|1|AA|A|311
9HLZ|1|AA|A|312
9HLZ|1|AA|U|313
9HLZ|1|AA|A|314
9HLZ|1|AA|A|315
9HLZ|1|AA|G|316
9HLZ|1|AA|U|317
9HLZ|1|AA|A|318
9HLZ|1|AA|U|319
*
9HLZ|1|AA|A|337
9HLZ|1|AA|G|338
9HLZ|1|AA|A|339
9HLZ|1|AA|A|340
9HLZ|1|AA|A|341
9HLZ|1|AA|A|342
9HLZ|1|AA|U|343
9HLZ|1|AA|A|344
*
9HLZ|1|AA|U|358
9HLZ|1|AA|A|359
9HLZ|1|AA|A|360
9HLZ|1|AA|G|361

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain GG

Large ribosomal subunit protein bL9m

Chain QQ

Large ribosomal subunit protein uL24m

Chain SS

Large ribosomal subunit protein bL28m

Chain bb

Large ribosomal subunit protein mL59