J3_9HLZ_006

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AA*UAAAAUC*GUU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|A|961
9HLZ|1|AA|A|962
*
9HLZ|1|AA|U|1062
9HLZ|1|AA|A|1063
9HLZ|1|AA|A|1064
9HLZ|1|AA|A|1065
9HLZ|1|AA|A|1066
9HLZ|1|AA|U|1067
9HLZ|1|AA|C|1068
*
9HLZ|1|AA|G|1085
9HLZ|1|AA|U|1086
9HLZ|1|AA|U|1087

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain 00

Large ribosomal subunit protein bL36m

Chain FF

Large ribosomal subunit protein uL6m

Chain KK

Large ribosomal subunit protein uL16m

Chain cc

Large ribosomal subunit protein mL60