J3_9HLZ_010

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAUCUUAA*UAU*AAUAAA

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|U|1426
9HLZ|1|AA|A|1427
9HLZ|1|AA|U|1428
9HLZ|1|AA|C|1429
9HLZ|1|AA|U|1430
9HLZ|1|AA|U|1431
9HLZ|1|AA|A|1432
9HLZ|1|AA|A|1433
*
9HLZ|1|AA|U|1489
9HLZ|1|AA|A|1490
9HLZ|1|AA|U|1491
*
9HLZ|1|AA|A|1522
9HLZ|1|AA|A|1523
9HLZ|1|AA|U|1524
9HLZ|1|AA|A|1525
9HLZ|1|AA|A|1526
9HLZ|1|AA|A|1527

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain BB

Large ribosomal subunit protein uL2m

Chain dd

Large ribosomal subunit protein mL67