J3_9HLZ_013

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UCG*CUAAU*AGACAA

Length

14 nucleotides

Bulged bases

9HLZ|1|AA|A|2093

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|U|1993
9HLZ|1|AA|C|1994
9HLZ|1|AA|G|1995
*
9HLZ|1|AA|C|2091
9HLZ|1|AA|U|2092
9HLZ|1|AA|A|2093
9HLZ|1|AA|A|2094
9HLZ|1|AA|U|2095
*
9HLZ|1|AA|A|2249
9HLZ|1|AA|G|2250
9HLZ|1|AA|A|2251
9HLZ|1|AA|C|2252
9HLZ|1|AA|A|2253
9HLZ|1|AA|A|2254

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain BB

Large ribosomal subunit protein uL2m

Chain GG

Large ribosomal subunit protein bL9m

Chain SS

Large ribosomal subunit protein bL28m