J3_9HLZ_016

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AAAA*UA*UAAAUU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|A|2447
9HLZ|1|AA|A|2448
9HLZ|1|AA|A|2449
9HLZ|1|AA|A|2450
*
9HLZ|1|AA|U|2466
9HLZ|1|AA|A|2467
*
9HLZ|1|AA|U|2582
9HLZ|1|AA|A|2583
9HLZ|1|AA|A|2584
9HLZ|1|AA|A|2585
9HLZ|1|AA|U|2586
9HLZ|1|AA|U|2587

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain EE

Large ribosomal subunit protein uL5m

Chain KK

Large ribosomal subunit protein uL16m

Chain RR

Large ribosomal subunit protein bL27m